PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010919316.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family NAC
Protein Properties Length: 301aa    MW: 33618.8 Da    PI: 9.2226
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010919316.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM106.43.6e-33682081128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......lelee.vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sg 81 
                     lp+G++F+Ptd+el+ e+L+ k++ ++      ++++  +i+   +i++++P++Lp  v+ +    +fF++ +k+y+tg+rk+r+++      + 
  XP_010919316.1  68 LPAGVKFDPTDQELL-EHLEGKARPDSqklhplIDEFIpTIEGEnGICYTHPEKLP-GVSRDGLIRHFFHRPSKAYTTGTRKRRKVHtdahggET 160
                     799************.99****998885565443332233665557**********.555555677******************74444555577 PP

             NAM  82 yWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                     +W++tgk+++vl+ +g+l+g kk+Lv+y   g+++k+ekt+Wvmh+y+l
  XP_010919316.1 161 RWHKTGKTRPVLA-GGKLKGYKKILVLYtnYGKQRKPEKTNWVMHQYHL 208
                     8************.9*************6657999999*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.22E-3860227IPR003441NAC domain
PROSITE profilePS5100533.92868227IPR003441NAC domain
PfamPF023653.9E-1569208IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000652Biological Processregulation of secondary cell wall biogenesis
GO:0005634Cellular Componentnucleus
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    Send to blast
MRDKERKMTW CNSCDDDRVI DRSSASSAAL ISKKSYANVI KTCPSCGHRI QYEEQVAAAA  60
AIQDLPGLPA GVKFDPTDQE LLEHLEGKAR PDSQKLHPLI DEFIPTIEGE NGICYTHPEK  120
LPGVSRDGLI RHFFHRPSKA YTTGTRKRRK VHTDAHGGET RWHKTGKTRP VLAGGKLKGY  180
KKILVLYTNY GKQRKPEKTN WVMHQYHLGS DEEEKDGELV VSKVFYQTQP RQCGSVAKDS  240
TVQGNSRGLN GDDHPILKDA SIVDYYNSSL ITYNQGGHNR ANSPHLIPNF AVHAGGTSYL  300
P
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00459DAPTransfer from AT4G28500Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010919316.10.0PREDICTED: NAC domain-containing protein 8-like
SwissprotO494591e-126NAC73_ARATH; NAC domain-containing protein 73
TrEMBLM0SKJ01e-157M0SKJ0_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr4P02730_0011e-156(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP30753786
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-124NAC domain containing protein 73